KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: hav00010 hav01200 hav01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: hav00010 hav01200 hav01230 hav01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: hav00010 hav00020 hav01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: hav00010 hav00020 hav00620 hav00785 hav01200 hav01210 hav01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: hav00020 hav01200 hav01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: hav00020 hav01200 hav01210 hav01230 hav01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: hav00020 hav01200 hav01210 hav01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: hav00030 hav01200 hav01100 hav01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: hav00030 hav01200 hav01100 hav01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: hav00030 hav01200 hav01230 hav01100 hav01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: hav00030 hav00230 hav01200 hav01230 hav01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: hav00030 hav01200 hav01100 hav01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:hav00040 hav00030 hav01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:hav00040 hav00030 hav01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:hav00052 hav01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:hav00052 hav01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:hav00053 hav01100 hav01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:hav00500 hav01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:hav00500 hav01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:hav00520 hav01250 hav01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:hav00520 hav00052 hav01250 hav01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:hav00520 hav01250 hav01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:hav00520 hav01100]
M00012 Glyoxylate cycle [PATH:hav00630 hav01200 hav01100 hav01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: hav00730 hav01240 hav01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: hav00730 hav01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: hav00740 hav01240 hav01100 hav01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: hav00750 hav01240 hav01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: hav00760 hav01240 hav01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: hav00770 hav01240 hav01100 hav01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: hav00770 hav01240 hav01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: hav00780 hav01240 hav01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: hav00780 hav01240 hav01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: hav00785 hav01240 hav01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: hav00790 hav00670 hav01240 hav01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: hav00790 hav01240 hav01100]
M00140 C1-unit interconversion, prokaryotes [PATH: hav00670 hav01240 hav01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: hav00860 hav01240 hav01100 hav01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: hav00860 hav01240 hav01100 hav01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: hav00860 hav01240 hav01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: hav00860 hav01240 hav01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: hav00130 hav01240 hav01100 hav01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: hav00130 hav01240 hav01100 hav01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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