KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: kpnk00010 kpnk01200 kpnk01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: kpnk00010 kpnk01200 kpnk01230 kpnk01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: kpnk00010 kpnk00020 kpnk01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: kpnk00010 kpnk00020 kpnk00620 kpnk00785 kpnk01200 kpnk01210 kpnk01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: kpnk00020 kpnk01200 kpnk01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: kpnk00020 kpnk01200 kpnk01210 kpnk01230 kpnk01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: kpnk00020 kpnk01200 kpnk01210 kpnk01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: kpnk00030 kpnk01200 kpnk01100 kpnk01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: kpnk00030 kpnk01200 kpnk01100 kpnk01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: kpnk00030 kpnk01200 kpnk01230 kpnk01100 kpnk01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: kpnk00030 kpnk00230 kpnk01200 kpnk01230 kpnk01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: kpnk00030 kpnk01200 kpnk01100 kpnk01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:kpnk00040 kpnk00030 kpnk01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:kpnk00040 kpnk00030 kpnk01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:kpnk00052 kpnk01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:kpnk00052 kpnk01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:kpnk00053 kpnk01100 kpnk01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:kpnk00500 kpnk01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:kpnk00500 kpnk01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:kpnk00520 kpnk01250 kpnk01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:kpnk00520 kpnk00052 kpnk01250 kpnk01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:kpnk00520 kpnk01250 kpnk01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:kpnk00520 kpnk01100]
M00012 Glyoxylate cycle [PATH:kpnk00630 kpnk01200 kpnk01100 kpnk01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: kpnk00730 kpnk01240 kpnk01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: kpnk00730 kpnk01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: kpnk00740 kpnk01240 kpnk01100 kpnk01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: kpnk00750 kpnk01240 kpnk01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: kpnk00760 kpnk01240 kpnk01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: kpnk00770 kpnk01240 kpnk01100 kpnk01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: kpnk00770 kpnk01240 kpnk01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: kpnk00780 kpnk01240 kpnk01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: kpnk00780 kpnk01240 kpnk01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: kpnk00785 kpnk01240 kpnk01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: kpnk00790 kpnk00670 kpnk01240 kpnk01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: kpnk00790 kpnk01240 kpnk01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: kpnk00860 kpnk01240 kpnk01100 kpnk01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: kpnk00860 kpnk01240 kpnk01100 kpnk01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: kpnk00860 kpnk01240 kpnk01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: kpnk00860 kpnk01240 kpnk01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: kpnk00130 kpnk01240 kpnk01100 kpnk01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: kpnk00130 kpnk01240 kpnk01100 kpnk01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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