KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: lca00010 lca01200 lca01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: lca00010 lca01200 lca01230 lca01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: lca00010 lca00020 lca01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: lca00010 lca00020 lca00620 lca00785 lca01200 lca01210 lca01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: lca00020 lca01200 lca01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: lca00020 lca01200 lca01210 lca01230 lca01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: lca00020 lca01200 lca01210 lca01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: lca00030 lca01200 lca01100 lca01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: lca00030 lca01200 lca01100 lca01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: lca00030 lca01200 lca01230 lca01100 lca01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: lca00030 lca00230 lca01200 lca01230 lca01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: lca00030 lca01200 lca01100 lca01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: lca00040 lca01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: lca00040 lca00030 lca01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: lca00052 lca01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: lca00040 lca00053 lca01240 lca01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH: lca00053 lca01100 lca01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: lca00500 lca01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: lca00500 lca01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: lca00520 lca01250 lca01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: lca00520 lca00052 lca01250 lca01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: lca00520 lca01250 lca01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: lca00520 lca01250 lca01100]
M00012 Glyoxylate cycle [PATH: lca00630 lca01200 lca01100 lca01110]
M00373 Ethylmalonyl pathway [PATH: lca00630 lca01200 lca01100 lca01120]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: lca00280 lca00630 lca00640 lca01200 lca01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: lca00562 lca01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: lca00562 lca01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: lca00562 lca01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: lca01100]
M00103 Cholecalciferol biosynthesis [PATH: lca01100]
M00106 Conjugated bile acid biosynthesis, cholate => taurocholate/glycocholate [PATH: lca01100]
M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH: lca01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: lca01100]
M00108 C21-Steroid hormone biosynthesis, progesterone => corticosterone/aldosterone [PATH: lca01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: lca01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: lca01100]
M00977 C19-Steroid hormone biosynthesis (androgen backdoor pathway), pregnenolone => androsterone => dihydrotestosterone [PATH: lca01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: lca01100]
M00073 N-glycan precursor trimming [PATH: lca01100]
M00075 N-glycan biosynthesis, complex type [PATH: lca01100]
M00056 O-glycan biosynthesis, mucin type core [PATH: lca01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: lca01100]
M00065 GPI-anchor biosynthesis, core oligosaccharide [PATH: lca01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: lca01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: lca01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH: lca01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: lca01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:lca00730 lca01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lca00740 lca01240 lca01100 lca01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:lca00750 lca01240 lca01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lca00760 lca01240 lca01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:lca00380 lca00760 lca01240 lca01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:lca00770 lca01240 lca01100 lca01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:lca00770 lca01240 lca01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:lca00780 lca01240 lca01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:lca00780 lca01240 lca01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lca00785 lca01240 lca01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:lca00785 lca01240 lca01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:lca00785 lca01240 lca01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:lca00790 lca00670 lca01240 lca01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:lca00790 lca01240 lca01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lca00790 lca01240 lca01100]
M00140 C1-unit interconversion, prokaryotes [PATH:lca00670 lca01240 lca01100]
M00141 C1-unit interconversion, eukaryotes [PATH:lca00670 lca01240 lca01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lca00860 lca01240 lca01100 lca01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:lca00860 lca01240 lca01100 lca01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:lca00860 lca01240 lca01100 lca01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:lca00860 lca01240 lca01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:lca00860 lca01240 lca01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:lca00860 lca01240 lca01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:lca00860 lca01240 lca01100]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:lca00130 lca01240 lca01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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