KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: mar00010 mar01200 mar01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: mar00010 mar01200 mar01230 mar01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: mar00010 mar00020 mar01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: mar00010 mar00020 mar00620 mar00785 mar01200 mar01210 mar01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: mar00020 mar01200 mar01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: mar00020 mar01200 mar01210 mar01230 mar01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: mar00020 mar01200 mar01210 mar01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: mar00030 mar01200 mar01100 mar01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: mar00030 mar01200 mar01100 mar01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: mar00030 mar01200 mar01230 mar01100 mar01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: mar00030 mar01200 mar01230 mar01100 mar01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: mar00030 mar00230 mar01200 mar01230 mar01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: mar00030 mar01200 mar01100 mar01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:mar00040 mar00030 mar01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:mar00040 mar00030 mar01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:mar00052 mar01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:mar00052 mar01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mar00500 mar01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:mar00500 mar01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:mar00500 mar01100 mar01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mar00520 mar01250 mar01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:mar00520 mar00052 mar01250 mar01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mar00520 mar01250 mar01100]
M00012 Glyoxylate cycle [PATH:mar00630 mar01200 mar01100 mar01110]
M00373 Ethylmalonyl pathway [PATH:mar00630 mar01200 mar01100 mar01120]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mar00280 mar00630 mar00640 mar01200 mar01100]
M00968 Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:mar00030 mar00230 mar00240 mar00630 mar01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: mar00730 mar01240 mar01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: mar00730 mar01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: mar00740 mar01240 mar01100 mar01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: mar00750 mar01240 mar01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: mar00750 mar01240 mar01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: mar00760 mar01240 mar01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH: mar00760 mar01100 mar01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: mar00770 mar01240 mar01100 mar01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: mar00770 mar01240 mar01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: mar00780 mar01240 mar01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: mar00780 mar01240 mar01100]
M00950 Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin [PATH: mar00780 mar01240 mar01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: mar00785 mar01240 mar01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: mar00785 mar01240 mar01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: mar00790 mar00670 mar01240 mar01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: mar00790 mar01240 mar01100]
M00140 C1-unit interconversion, prokaryotes [PATH: mar00670 mar01240 mar01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: mar00860 mar01240 mar01100 mar01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: mar00860 mar01240 mar01100 mar01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: mar00860 mar01240 mar01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: mar00860 mar01240 mar01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH: mar00860 mar01240 mar01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: mar00860 mar01240 mar01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: mar00130 mar01240 mar01100 mar01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: mar00130 mar01240 mar01100 mar01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH: mar00130 mar01240 mar01100 mar01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00625 Methicillin resistance [PATH:mar01501]
M00627 beta-Lactam resistance, Bla system [PATH:mar01501]
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
Plant pathogenicity
Symbiosis
Module set
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