KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: mma00010 mma01200 mma01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: mma00010 mma01200 mma01230 mma01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: mma00010 mma00020 mma01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: mma00010 mma00020 mma00620 mma01200 mma01210 mma01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: mma00020 mma01200 mma01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: mma00020 mma01200 mma01210 mma01230 mma01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: mma00020 mma01200 mma01210 mma01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: mma00030 mma01200 mma01100 mma01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: mma00030 mma01200 mma01100 mma01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: mma00030 mma01200 mma01230 mma01100 mma01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: mma00030 mma01200 mma01230 mma01100 mma01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: mma00030 mma00230 mma01200 mma01230 mma01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: mma00030 mma01200 mma01100 mma01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:mma00040 mma00030 mma01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:mma00040 mma00030 mma01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:mma00052 mma01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:mma00052 mma01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mma00500 mma01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:mma00500 mma01100 mma01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mma00520 mma01250 mma01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:mma00520 mma00052 mma01250 mma01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mma00520 mma01250 mma01100]
M00012 Glyoxylate cycle [PATH:mma00630 mma01200 mma01100 mma01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mma00280 mma00630 mma00640 mma01200 mma01100]
M00968 Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:mma00030 mma00230 mma00240 mma00630 mma01100]
Energy metabolism
Carbon fixation
Methane metabolism
M00567 Methanogenesis, CO2 => methane [PATH: mma00680 mma01200 mma01100 mma01120]
M00357 Methanogenesis, acetate => methane [PATH: mma00680 mma01200 mma01100 mma01120]
M00356 Methanogenesis, methanol => methane [PATH: mma00680 mma01200 mma01100 mma01120]
M00563 Methanogenesis, methylamine/dimethylamine/trimethylamine => methane [PATH: mma00680 mma01200 mma01100 mma01120]
M00358 Coenzyme M biosynthesis [PATH: mma00680 mma01240 mma01100 mma01120]
M00608 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate [PATH: mma00300 mma00680 mma01210 mma01230 mma01240 mma01100 mma01120]
M00174 Methane oxidation, methanotroph, methane => formaldehyde [PATH: mma00680 mma01200 mma01220 mma01100 mma01120]
M00345 Formaldehyde assimilation, ribulose monophosphate pathway [PATH: mma00030 mma00680 mma01200 mma01230 mma01100 mma01120]
M00378 F420 biosynthesis, archaea [PATH: mma00680 mma01240 mma01100 mma01120]
M00935 Methanofuran biosynthesis [PATH: mma00680 mma01240 mma01100]
M00422 Acetyl-CoA pathway, CO2 => acetyl-CoA [PATH: mma00680 mma01200 mma01100 mma01120]
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:mma00730 mma01240 mma01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:mma00730 mma01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:mma00740 mma01240 mma01100 mma01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:mma00750 mma01240 mma01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mma00750 mma01240 mma01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mma00760 mma01240 mma01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:mma00770 mma01240 mma01100 mma01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:mma00770 mma01240 mma01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:mma00780 mma01240 mma01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mma00780 mma01240 mma01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:mma00780 mma01240 mma01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mma01240 mma01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:mma00790 mma00670 mma01240 mma01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mma00790 mma01240 mma01100]
M00140 C1-unit interconversion, prokaryotes [PATH:mma00670 mma01240 mma01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mma00860 mma01240 mma01100 mma01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mma00860 mma01240 mma01100 mma01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:mma00860 mma01240 mma01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:mma00860 mma01240 mma01100 mma01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:mma00860 mma01240 mma01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mma00860 mma01240 mma01100]
M00836 Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430 [PATH:mma00860 mma01240 mma01100 mma01120]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:mma00130 mma01240 mma01100 mma01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:mma00130 mma01240 mma01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
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