KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: mth00010 mth01200 mth01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: mth00010 mth01200 mth01230 mth01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: mth00010 mth00020 mth01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: mth00010 mth00020 mth00620 mth00785 mth01200 mth01210 mth01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: mth00020 mth01200 mth01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: mth00020 mth01200 mth01210 mth01230 mth01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: mth00020 mth01200 mth01210 mth01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: mth00030 mth01200 mth01100 mth01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: mth00030 mth01200 mth01100 mth01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: mth00030 mth01200 mth01230 mth01100 mth01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: mth00030 mth01200 mth01230 mth01100 mth01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: mth00030 mth00230 mth01200 mth01230 mth01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: mth00030 mth01200 mth01100 mth01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: mth01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: mth00030 mth01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: mth00030 mth01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: mth00052 mth01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: mth00052 mth01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: mth00500 mth01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: mth00500 mth01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: mth00500 mth01100 mth01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: mth00520 mth01250 mth01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: mth00520 mth00052 mth01250 mth01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: mth00520 mth01250 mth01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: mth00520 mth01250 mth01100]
M00012 Glyoxylate cycle [PATH: mth00630 mth01200 mth01100 mth01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: mth00280 mth00630 mth00640 mth01200 mth01100]
M00968 Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH: mth00030 mth00230 mth00240 mth00630 mth01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: mth00562 mth01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: mth00562 mth01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: mth00562 mth01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00103 Cholecalciferol biosynthesis [PATH:mth01100]
M00104 Bile acid biosynthesis, cholesterol => cholate/chenodeoxycholate [PATH:mth01100]
M00106 Conjugated bile acid biosynthesis, cholate => taurocholate/glycocholate [PATH:mth01100]
M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH:mth01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH:mth01100]
M00108 C21-Steroid hormone biosynthesis, progesterone => corticosterone/aldosterone [PATH:mth01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH:mth01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH:mth01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH:mth01100]
M00977 C19-Steroid hormone biosynthesis (androgen backdoor pathway), pregnenolone => androsterone => dihydrotestosterone [PATH:mth01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: mth00400 mth01230 mth01100 mth01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: mth00400 mth01230 mth01100 mth01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: mth00400 mth01230 mth01100 mth01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: mth00400 mth01230 mth01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: mth00350 mth01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: mth00350 mth01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: mth00350 mth01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: mth00380 mth01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: mth00380 mth01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: mth01100]
M00073 N-glycan precursor trimming [PATH: mth01100]
M00075 N-glycan biosynthesis, complex type [PATH: mth01100]
M00056 O-glycan biosynthesis, mucin type core [PATH: mth01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: mth01100]
M00065 GPI-anchor biosynthesis, core oligosaccharide [PATH: mth01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: mth01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: mth01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH: mth01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: mth01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: mth00730 mth01240 mth01100]
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH: mth00730 mth01240 mth01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: mth00730 mth01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: mth00740 mth01240 mth01100 mth01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: mth00750 mth01240 mth01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: mth00750 mth01240 mth01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: mth00760 mth01240 mth01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH: mth00380 mth00760 mth01240 mth01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: mth00770 mth01240 mth01100 mth01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: mth00770 mth01240 mth01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: mth00780 mth01240 mth01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: mth00780 mth01240 mth01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: mth00785 mth01240 mth01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: mth00785 mth01240 mth01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: mth00785 mth01240 mth01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: mth00790 mth00670 mth01240 mth01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH: mth00790 mth01240 mth01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: mth00790 mth01240 mth01100]
M00140 C1-unit interconversion, prokaryotes [PATH: mth00670 mth01240 mth01100]
M00141 C1-unit interconversion, eukaryotes [PATH: mth00670 mth01240 mth01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: mth00860 mth01240 mth01100 mth01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: mth00860 mth01240 mth01100 mth01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: mth00860 mth01240 mth01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH: mth00860 mth01240 mth01100 mth01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: mth00860 mth01240 mth01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: mth00860 mth01240 mth01100]
M00836 Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430 [PATH: mth00860 mth01240 mth01100 mth01120]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: mth01240 mth01100 mth01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: mth01240 mth01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: mth01240 mth01100 mth01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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