KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pav00010 pav01200 pav01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pav00010 pav01200 pav01230 pav01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pav00010 pav00020 pav01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pav00010 pav00020 pav00620 pav00785 pav01200 pav01210 pav01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pav00020 pav01200 pav01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pav00020 pav01200 pav01210 pav01230 pav01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pav00020 pav01200 pav01210 pav01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pav00030 pav01200 pav01100 pav01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pav00030 pav01200 pav01100 pav01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pav00030 pav01200 pav01230 pav01100 pav01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pav00030 pav00230 pav01200 pav01230 pav01100]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pav00040 pav00030 pav01100]
M00081 Pectin degradation [PATH:pav00040 pav01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pav00052 pav01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:pav00051 pav00053 pav01240 pav01100 pav01110]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pav00500 pav01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:pav00500 pav01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pav00520 pav01250 pav01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:pav00520 pav01250 pav01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pav00520 pav01250 pav01100]
M00012 Glyoxylate cycle [PATH:pav00630 pav01200 pav01100 pav01110]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:pav00562 pav01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:pav00730 pav01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pav00740 pav01240 pav01100 pav01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pav00750 pav01240 pav01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pav00750 pav01240 pav01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pav00760 pav01240 pav01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pav00770 pav01240 pav01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pav00780 pav01240 pav01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pav00780 pav01240 pav01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:pav00780 pav01240 pav01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pav00785 pav01240 pav01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:pav00785 pav01240 pav01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pav00790 pav00670 pav01240 pav01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pav00790 pav01240 pav01100]
M00140 C1-unit interconversion, prokaryotes [PATH:pav00670 pav01240 pav01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pav00860 pav01240 pav01100 pav01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pav00860 pav01240 pav01100 pav01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pav00860 pav01240 pav01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pav00130 pav01240 pav01100 pav01110]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:pav00130 pav01240 pav01100 pav01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:pav00130 pav01240 pav01100 pav01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:pav00130 pav01240 pav01100 pav01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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