KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pcu00010 pcu01200 pcu01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pcu00010 pcu01200 pcu01230 pcu01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pcu00010 pcu00020 pcu01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pcu00010 pcu00020 pcu00620 pcu00785 pcu01200 pcu01210 pcu01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pcu00020 pcu01200 pcu01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pcu00020 pcu01200 pcu01210 pcu01230 pcu01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pcu00020 pcu01200 pcu01210 pcu01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pcu00030 pcu01200 pcu01100 pcu01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pcu00030 pcu01200 pcu01100 pcu01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pcu00030 pcu01200 pcu01230 pcu01100 pcu01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pcu00030 pcu00230 pcu01200 pcu01230 pcu01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pcu00030 pcu01200 pcu01100 pcu01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pcu01100]
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pcu00740 pcu01240 pcu01100 pcu01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pcu01240 pcu01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pcu01240 pcu01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pcu00760 pcu01240 pcu01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pcu00770 pcu01240 pcu01100 pcu01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pcu00770 pcu01240 pcu01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pcu00780 pcu01240 pcu01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pcu00780 pcu01240 pcu01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pcu00785 pcu01240 pcu01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:pcu00785 pcu01240 pcu01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pcu00790 pcu00670 pcu01240 pcu01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pcu00790 pcu01240 pcu01100]
M00141 C1-unit interconversion, eukaryotes [PATH:pcu00670 pcu01240 pcu01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pcu00860 pcu01240 pcu01100 pcu01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pcu00860 pcu01240 pcu01100 pcu01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pcu00860 pcu01240 pcu01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pcu00130 pcu01240 pcu01100 pcu01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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