KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pdr00010 pdr01200 pdr01230 pdr01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pdr00010 pdr00020 pdr01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdr00010 pdr00020 pdr00620 pdr00785 pdr01200 pdr01210 pdr01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pdr00020 pdr01200 pdr01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pdr00020 pdr01200 pdr01210 pdr01230 pdr01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pdr00020 pdr01200 pdr01210 pdr01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pdr00030 pdr01200 pdr01230 pdr01100 pdr01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pdr00030 pdr00230 pdr01200 pdr01230 pdr01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pdr00030 pdr01200 pdr01100 pdr01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pdr00740 pdr01240 pdr01100 pdr01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pdr00750 pdr01240 pdr01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pdr00760 pdr01240 pdr01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pdr00770 pdr01240 pdr01100 pdr01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pdr00770 pdr01240 pdr01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pdr00780 pdr01240 pdr01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pdr00780 pdr01240 pdr01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pdr00785 pdr01240 pdr01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pdr00790 pdr01240 pdr01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pdr00860 pdr01240 pdr01100 pdr01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pdr00860 pdr01240 pdr01100 pdr01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pdr00860 pdr01240 pdr01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pdr00130 pdr01240 pdr01100 pdr01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00718 Multidrug resistance, efflux pump MexAB-OprM
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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