KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pdz00010 pdz01200 pdz01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pdz00010 pdz01200 pdz01230 pdz01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pdz00010 pdz00020 pdz01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pdz00010 pdz00020 pdz00620 pdz00785 pdz01200 pdz01210 pdz01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pdz00020 pdz01200 pdz01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pdz00020 pdz01200 pdz01210 pdz01230 pdz01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pdz00020 pdz01200 pdz01210 pdz01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pdz00030 pdz01200 pdz01100 pdz01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pdz00030 pdz01200 pdz01100 pdz01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pdz00030 pdz01200 pdz01230 pdz01100 pdz01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pdz00030 pdz00230 pdz01200 pdz01230 pdz01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pdz00030 pdz01200 pdz01100 pdz01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pdz00040 pdz00030 pdz01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pdz00040 pdz00030 pdz01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pdz00052 pdz01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pdz00052 pdz01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:pdz00053 pdz01100 pdz01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pdz00500 pdz01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:pdz00500 pdz01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pdz00500 pdz01100 pdz01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pdz00520 pdz01250 pdz01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pdz00520 pdz00052 pdz01250 pdz01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pdz00520 pdz01250 pdz01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pdz00520 pdz01100]
M00012 Glyoxylate cycle [PATH:pdz00630 pdz01200 pdz01100 pdz01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: pdz00730 pdz01240 pdz01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: pdz00730 pdz01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: pdz00740 pdz01240 pdz01100 pdz01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: pdz00750 pdz01240 pdz01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: pdz00760 pdz01240 pdz01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: pdz00770 pdz01240 pdz01100 pdz01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: pdz00770 pdz01240 pdz01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: pdz00780 pdz01240 pdz01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: pdz00780 pdz01240 pdz01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: pdz00785 pdz01240 pdz01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: pdz00790 pdz00670 pdz01240 pdz01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: pdz00790 pdz01240 pdz01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: pdz00860 pdz01240 pdz01100 pdz01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: pdz00860 pdz01240 pdz01100 pdz01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: pdz00860 pdz01240 pdz01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: pdz00860 pdz01240 pdz01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: pdz00130 pdz01240 pdz01100 pdz01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: pdz00130 pdz01240 pdz01100 pdz01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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