KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pec00010 pec01200 pec01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pec00010 pec01200 pec01230 pec01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pec00010 pec00020 pec01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pec00010 pec00020 pec00620 pec00785 pec01200 pec01210 pec01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pec00020 pec01200 pec01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pec00020 pec01200 pec01210 pec01230 pec01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pec00020 pec01200 pec01210 pec01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pec00030 pec01200 pec01100 pec01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pec00030 pec01200 pec01100 pec01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pec00030 pec01200 pec01230 pec01100 pec01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pec00030 pec00230 pec01200 pec01230 pec01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pec00030 pec01200 pec01100 pec01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pec00040 pec00030 pec01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pec00040 pec00030 pec01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pec00052 pec01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pec00052 pec01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pec00500 pec01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:pec00500 pec01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pec00520 pec01250 pec01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pec00520 pec00052 pec01250 pec01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pec00520 pec01250 pec01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pec00520 pec01100]
M00012 Glyoxylate cycle [PATH:pec00630 pec01200 pec01100 pec01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pec00280 pec00630 pec00640 pec01200 pec01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: pec00730 pec01240 pec01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: pec00730 pec01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: pec00740 pec01240 pec01100 pec01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: pec00750 pec01240 pec01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: pec00750 pec01240 pec01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: pec00760 pec01240 pec01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: pec00770 pec01240 pec01100 pec01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: pec00770 pec01240 pec01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: pec00780 pec01240 pec01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: pec00780 pec01240 pec01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: pec00785 pec01240 pec01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: pec00790 pec00670 pec01240 pec01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: pec00790 pec01240 pec01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: pec00860 pec01240 pec01100 pec01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: pec00860 pec01240 pec01100 pec01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: pec00860 pec01240 pec01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: pec00130 pec01240 pec01100 pec01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: pec00130 pec01240 pec01100 pec01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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