KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pfa00010 pfa01200 pfa01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pfa00010 pfa01200 pfa01230 pfa01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pfa00010 pfa00020 pfa01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pfa00010 pfa00020 pfa00620 pfa00785 pfa01200 pfa01210 pfa01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pfa00020 pfa01200 pfa01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pfa00020 pfa01200 pfa01210 pfa01230 pfa01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pfa00020 pfa01200 pfa01210 pfa01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pfa00030 pfa01200 pfa01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pfa00030 pfa01200 pfa01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pfa00030 pfa01200 pfa01230 pfa01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pfa00030 pfa00230 pfa01200 pfa01230 pfa01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pfa00030 pfa01200 pfa01100]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pfa00040 pfa00030 pfa01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pfa00052 pfa01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pfa00052 pfa01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pfa00500 pfa01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pfa00520 pfa01250 pfa01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pfa00520 pfa00052 pfa01250 pfa01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pfa00520 pfa01250 pfa01100]
M00012 Glyoxylate cycle [PATH:pfa00630 pfa01200 pfa01100 pfa01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:pfa00730 pfa01240 pfa01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:pfa00730 pfa01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pfa00740 pfa01240 pfa01100 pfa01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pfa00750 pfa01240 pfa01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pfa00750 pfa01240 pfa01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfa00760 pfa01240 pfa01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pfa00770 pfa01240 pfa01100 pfa01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfa00770 pfa01240 pfa01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfa00780 pfa01240 pfa01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfa00785 pfa01240 pfa01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:pfa00785 pfa01240 pfa01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pfa00790 pfa00670 pfa01240 pfa01100]
M00841 Tetrahydrofolate biosynthesis, mediated by PTPS, GTP => THF [PATH:pfa00790 pfa01240 pfa01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfa00790 pfa01240 pfa01100]
M00140 C1-unit interconversion, prokaryotes [PATH:pfa00670 pfa01240 pfa01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pfa00860 pfa01240 pfa01100 pfa01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pfa00860 pfa01240 pfa01100 pfa01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:pfa00860 pfa01240 pfa01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:pfa00860 pfa01240 pfa01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pfa00860 pfa01240 pfa01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfa01240 pfa01100 pfa01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pfa01240 pfa01100 pfa01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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