KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pph00010 pph01200 pph01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pph00010 pph01200 pph01230 pph01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pph00010 pph00020 pph01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pph00010 pph00020 pph00620 pph00785 pph01200 pph01210 pph01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pph00020 pph01200 pph01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pph00020 pph01200 pph01210 pph01230 pph01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pph00020 pph01200 pph01210 pph01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pph00030 pph01200 pph01100 pph01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pph00030 pph01200 pph01100 pph01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pph00030 pph01200 pph01230 pph01100 pph01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pph00030 pph00230 pph01200 pph01230 pph01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pph00030 pph01200 pph01100 pph01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pph00040 pph00030 pph01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pph00040 pph00030 pph01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pph00052 pph01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pph00052 pph01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pph00500 pph01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:pph00500 pph01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pph00500 pph01100 pph01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pph00520 pph01250 pph01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pph00520 pph00052 pph01250 pph01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pph00520 pph01250 pph01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pph00520 pph01100]
M00012 Glyoxylate cycle [PATH:pph00630 pph01200 pph01100 pph01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pph00280 pph00630 pph00640 pph01200 pph01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
M00598 Anoxygenic photosystem I
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:pph00730 pph01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pph00740 pph01240 pph01100 pph01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pph00750 pph01240 pph01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pph00760 pph01240 pph01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH:pph00760 pph01100 pph01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pph00770 pph01240 pph01100 pph01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pph00770 pph01240 pph01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pph00780 pph01240 pph01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pph00780 pph01240 pph01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pph00785 pph01240 pph01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pph00790 pph00670 pph01240 pph01100]
M00843 L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4 [PATH:pph00790 pph01240 pph01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pph00790 pph01240 pph01100]
M00140 C1-unit interconversion, prokaryotes [PATH:pph00670 pph01240 pph01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pph00860 pph01240 pph01100 pph01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pph00860 pph01240 pph01100 pph01110]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:pph00860 pph01240 pph01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pph00860 pph01240 pph01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pph00130 pph01240 pph01100 pph01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pph00130 pph01240 pph01100 pph01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:pph01501]
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00614 Anoxygenic photosynthesis in green sulfur bacteria
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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