KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pse00010 pse01200 pse01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pse00010 pse01200 pse01230 pse01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pse00010 pse00020 pse01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pse00010 pse00020 pse00620 pse00785 pse01200 pse01210 pse01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pse00020 pse01200 pse01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pse00020 pse01200 pse01210 pse01230 pse01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pse00020 pse01200 pse01210 pse01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pse00030 pse01200 pse01100 pse01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pse00030 pse01200 pse01100 pse01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pse00030 pse01200 pse01230 pse01100 pse01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pse00030 pse00230 pse01200 pse01230 pse01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pse00030 pse01200 pse01100 pse01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: pse00040 pse01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: pse00040 pse00030 pse01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: pse00040 pse00030 pse01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: pse00052 pse01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: pse00052 pse01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: pse00040 pse00053 pse01240 pse01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: pse00500 pse01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: pse00500 pse01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: pse00500 pse01100 pse01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: pse00520 pse01250 pse01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: pse00520 pse00052 pse01250 pse01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: pse00520 pse01250 pse01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: pse00520 pse01250 pse01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH: pse00520 pse01100]
M00012 Glyoxylate cycle [PATH: pse00630 pse01200 pse01100 pse01110]
M00373 Ethylmalonyl pathway [PATH: pse00630 pse01200 pse01100 pse01120]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: pse00280 pse00630 pse00640 pse01200 pse01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: pse00562 pse01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: pse00562 pse01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: pse00562 pse01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: pse01100]
M00103 Cholecalciferol biosynthesis [PATH: pse01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: pse01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: pse01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: pse01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH: pse00300 pse01230 pse01100]
M00526 Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH: pse00300 pse01230 pse01100]
M00527 Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH: pse00300 pse01230 pse01100 pse01110]
M00032 Lysine degradation, lysine => saccharopine => acetoacetyl-CoA [PATH: pse00310 pse01210 pse01100]
M00957 Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH: pse00310 pse01100 pse01120]
M00960 Lysine degradation, bacteria, L-lysine => D-lysine => succinate [PATH: pse00310 pse01100 pse01120]
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: pse00400 pse01230 pse01100 pse01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: pse00400 pse01230 pse01100 pse01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: pse00400 pse01230 pse01100 pse01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: pse00400 pse01230 pse01100]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH: pse00400 pse01230 pse01100 pse01110]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: pse00350 pse01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: pse00350 pse01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: pse00350 pse01100]
M00533 Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH: pse00350 pse01220 pse01100 pse01120]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: pse00380 pse01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: pse00380 pse01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00073 N-glycan precursor trimming [PATH:pse01100]
M00075 N-glycan biosynthesis, complex type [PATH:pse01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH:pse01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH:pse01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH:pse01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH:pse01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:pse00730 pse01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pse00740 pse01240 pse01100 pse01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pse00750 pse01240 pse01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pse00750 pse01240 pse01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pse00760 pse01240 pse01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:pse00380 pse00760 pse01240 pse01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pse00770 pse01240 pse01100 pse01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pse00770 pse01240 pse01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pse00780 pse01240 pse01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pse00780 pse01240 pse01100]
M00950 Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin [PATH:pse00780 pse01240 pse01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pse00785 pse01240 pse01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:pse00785 pse01240 pse01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:pse00785 pse01240 pse01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pse00790 pse00670 pse01240 pse01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:pse00790 pse01240 pse01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pse00790 pse01240 pse01100]
M00140 C1-unit interconversion, prokaryotes [PATH:pse00670 pse01240 pse01100]
M00141 C1-unit interconversion, eukaryotes [PATH:pse00670 pse01240 pse01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pse00860 pse01240 pse01100 pse01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pse00860 pse01240 pse01100 pse01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:pse00860 pse01240 pse01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:pse00860 pse01240 pse01100 pse01110]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:pse00860 pse01240 pse01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pse00860 pse01240 pse01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pse00130 pse01240 pse01100 pse01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:pse00130 pse01240 pse01100]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:pse00130 pse01240 pse01100]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:pse00130 pse01240 pse01100 pse01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00851 Carbapenem resistance [PATH: pse01501]
M00627 beta-Lactam resistance, Bla system [PATH: pse01501]
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
|
|