KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pvd00010 pvd01200 pvd01230 pvd01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pvd00010 pvd00020 pvd01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pvd00010 pvd00020 pvd00620 pvd00785 pvd01200 pvd01210 pvd01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pvd00020 pvd01200 pvd01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pvd00020 pvd01200 pvd01210 pvd01230 pvd01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pvd00020 pvd01200 pvd01210 pvd01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pvd00030 pvd01200 pvd01100 pvd01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pvd00030 pvd01200 pvd01100 pvd01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pvd00030 pvd01200 pvd01230 pvd01100 pvd01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pvd00030 pvd00230 pvd01200 pvd01230 pvd01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pvd00030 pvd01200 pvd01100 pvd01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pvd00740 pvd01240 pvd01100 pvd01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pvd00750 pvd01240 pvd01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pvd00760 pvd01240 pvd01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pvd00770 pvd01240 pvd01100 pvd01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pvd00770 pvd01240 pvd01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pvd00780 pvd01240 pvd01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pvd00780 pvd01240 pvd01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pvd00785 pvd01240 pvd01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pvd00790 pvd00670 pvd01240 pvd01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pvd00790 pvd01240 pvd01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pvd00860 pvd01240 pvd01100 pvd01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pvd00860 pvd01240 pvd01100 pvd01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pvd00860 pvd01240 pvd01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pvd00130 pvd01240 pvd01100 pvd01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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