KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sae00010 sae01200 sae01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sae00010 sae01200 sae01230 sae01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sae00010 sae00020 sae01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sae00010 sae00020 sae00620 sae00785 sae01200 sae01210 sae01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sae00020 sae01200 sae01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sae00020 sae01200 sae01210 sae01230 sae01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sae00020 sae01200 sae01210 sae01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sae00030 sae01200 sae01100 sae01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sae00030 sae01200 sae01100 sae01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sae00030 sae01200 sae01230 sae01100 sae01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: sae00030 sae01200 sae01230 sae01100 sae01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sae00030 sae00230 sae01200 sae01230 sae01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sae00030 sae01200 sae01100 sae01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sae00040 sae00030 sae01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sae00052 sae01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sae00500 sae01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:sae00500 sae01100 sae01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sae00520 sae01250 sae01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sae00520 sae00052 sae01250 sae01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sae00520 sae01250 sae01100]
M00012 Glyoxylate cycle [PATH:sae00630 sae01200 sae01100 sae01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sae00280 sae00630 sae00640 sae01200 sae01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sae00730 sae01240 sae01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: sae00730 sae01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sae00740 sae01240 sae01100 sae01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sae00750 sae01240 sae01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: sae00750 sae01240 sae01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sae00760 sae01240 sae01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sae00770 sae01240 sae01100 sae01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sae00770 sae01240 sae01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sae00780 sae01240 sae01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH: sae00780 sae01240 sae01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sae00785 sae01240 sae01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: sae00785 sae01240 sae01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sae00790 sae00670 sae01240 sae01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sae00790 sae01240 sae01100]
M00140 C1-unit interconversion, prokaryotes [PATH: sae00670 sae01240 sae01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sae00860 sae01240 sae01100 sae01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: sae00860 sae01240 sae01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH: sae00860 sae01240 sae01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sae00860 sae01240 sae01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sae00130 sae01240 sae01100 sae01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sae00130 sae01240 sae01100 sae01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00704 Tetracycline resistance, efflux pump Tet38
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:sae01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:sae01503]
M00730 Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [PATH:sae01503]
M00700 Multidrug resistance, efflux pump AbcA
M00702 Multidrug resistance, efflux pump NorB
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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