KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sav00010 sav01200 sav01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sav00010 sav01200 sav01230 sav01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sav00010 sav00020 sav01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sav00010 sav00020 sav00620 sav00785 sav01200 sav01210 sav01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sav00020 sav01200 sav01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sav00020 sav01200 sav01210 sav01230 sav01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sav00020 sav01200 sav01210 sav01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sav00030 sav01200 sav01100 sav01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sav00030 sav01200 sav01100 sav01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sav00030 sav01200 sav01230 sav01100 sav01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: sav00030 sav01200 sav01230 sav01100 sav01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sav00030 sav00230 sav01200 sav01230 sav01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sav00030 sav01200 sav01100 sav01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:sav00040 sav00030 sav01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sav00052 sav01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:sav00052 sav01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sav00500 sav01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sav00520 sav01250 sav01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sav00520 sav00052 sav01250 sav01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sav00520 sav01250 sav01100]
M00012 Glyoxylate cycle [PATH:sav00630 sav01200 sav01100 sav01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:sav00730 sav01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sav00740 sav01240 sav01100 sav01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sav00750 sav01240 sav01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:sav00750 sav01240 sav01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sav00760 sav01240 sav01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sav00770 sav01240 sav01100 sav01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:sav00770 sav01240 sav01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sav00780 sav01240 sav01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:sav00780 sav01240 sav01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sav00785 sav01240 sav01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:sav00785 sav01240 sav01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:sav00790 sav00670 sav01240 sav01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sav00790 sav01240 sav01100]
M00140 C1-unit interconversion, prokaryotes [PATH:sav00670 sav01240 sav01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sav00860 sav01240 sav01100 sav01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:sav00860 sav01240 sav01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sav00130 sav01240 sav01100 sav01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sav00130 sav01240 sav01100 sav01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00625 Methicillin resistance [PATH:sav01501]
M00704 Tetracycline resistance, efflux pump Tet38
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:sav01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:sav01503]
M00730 Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [PATH:sav01503]
M00700 Multidrug resistance, efflux pump AbcA
M00702 Multidrug resistance, efflux pump NorB
M00714 Multidrug resistance, efflux pump QacA
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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