KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: seen00010 seen01200 seen01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: seen00010 seen01200 seen01230 seen01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: seen00010 seen00020 seen01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: seen00010 seen00020 seen00620 seen00785 seen01200 seen01210 seen01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: seen00020 seen01200 seen01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: seen00020 seen01200 seen01210 seen01230 seen01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: seen00020 seen01200 seen01210 seen01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: seen00030 seen01200 seen01100 seen01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: seen00030 seen01200 seen01100 seen01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: seen00030 seen01200 seen01230 seen01100 seen01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: seen00030 seen00230 seen01200 seen01230 seen01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: seen00030 seen01200 seen01100 seen01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:seen00040 seen00030 seen01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:seen00052 seen01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:seen00052 seen01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:seen00053 seen01100 seen01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:seen00500 seen01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:seen00500 seen01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:seen00500 seen01100 seen01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:seen00520 seen01250 seen01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:seen00520 seen00052 seen01250 seen01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:seen00520 seen01250 seen01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:seen00520 seen01100]
M00012 Glyoxylate cycle [PATH:seen00630 seen01200 seen01100 seen01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: seen00730 seen01240 seen01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: seen00730 seen01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: seen00740 seen01240 seen01100 seen01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: seen00750 seen01240 seen01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: seen00760 seen01240 seen01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: seen00770 seen01240 seen01100 seen01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: seen00770 seen01240 seen01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: seen00780 seen01240 seen01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: seen00780 seen01240 seen01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: seen00785 seen01240 seen01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: seen00790 seen00670 seen01240 seen01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: seen00790 seen01240 seen01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: seen00860 seen01240 seen01100 seen01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: seen00860 seen01240 seen01100 seen01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: seen00860 seen01240 seen01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: seen00860 seen01240 seen01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: seen00130 seen01240 seen01100 seen01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: seen00130 seen01240 seen01100 seen01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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