KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: senb00010 senb01200 senb01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: senb00010 senb01200 senb01230 senb01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: senb00010 senb00020 senb01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: senb00010 senb00020 senb00620 senb00785 senb01200 senb01210 senb01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: senb00020 senb01200 senb01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: senb00020 senb01200 senb01210 senb01230 senb01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: senb00020 senb01200 senb01210 senb01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: senb00030 senb01200 senb01100 senb01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: senb00030 senb01200 senb01100 senb01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: senb00030 senb01200 senb01230 senb01100 senb01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: senb00030 senb00230 senb01200 senb01230 senb01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: senb00030 senb01200 senb01100 senb01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:senb00040 senb00030 senb01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:senb00052 senb01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:senb00052 senb01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:senb00053 senb01100 senb01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:senb00500 senb01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:senb00500 senb01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:senb00500 senb01100 senb01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:senb00520 senb01250 senb01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:senb00520 senb00052 senb01250 senb01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:senb00520 senb01250 senb01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:senb00520 senb01100]
M00012 Glyoxylate cycle [PATH:senb00630 senb01200 senb01100 senb01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: senb00730 senb01240 senb01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: senb00730 senb01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: senb00740 senb01240 senb01100 senb01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: senb00750 senb01240 senb01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: senb00760 senb01240 senb01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: senb00770 senb01240 senb01100 senb01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: senb00770 senb01240 senb01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: senb00780 senb01240 senb01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: senb00780 senb01240 senb01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: senb00785 senb01240 senb01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: senb00790 senb00670 senb01240 senb01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: senb00790 senb01240 senb01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: senb00860 senb01240 senb01100 senb01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: senb00860 senb01240 senb01100 senb01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: senb00860 senb01240 senb01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: senb00860 senb01240 senb01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: senb00130 senb01240 senb01100 senb01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: senb00130 senb01240 senb01100 senb01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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