KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: senc00010 senc01200 senc01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: senc00010 senc01200 senc01230 senc01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: senc00010 senc00020 senc01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: senc00010 senc00020 senc00620 senc00785 senc01200 senc01210 senc01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: senc00020 senc01200 senc01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: senc00020 senc01200 senc01210 senc01230 senc01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: senc00020 senc01200 senc01210 senc01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: senc00030 senc01200 senc01100 senc01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: senc00030 senc01200 senc01100 senc01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: senc00030 senc01200 senc01230 senc01100 senc01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: senc00030 senc00230 senc01200 senc01230 senc01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: senc00030 senc01200 senc01100 senc01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:senc00040 senc00030 senc01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:senc00052 senc01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:senc00052 senc01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:senc00053 senc01100 senc01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:senc00500 senc01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:senc00500 senc01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:senc00500 senc01100 senc01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:senc00520 senc01250 senc01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:senc00520 senc00052 senc01250 senc01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:senc00520 senc01250 senc01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:senc00520 senc01100]
M00012 Glyoxylate cycle [PATH:senc00630 senc01200 senc01100 senc01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: senc00730 senc01240 senc01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: senc00730 senc01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: senc00740 senc01240 senc01100 senc01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: senc00750 senc01240 senc01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: senc00760 senc01240 senc01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: senc00770 senc01240 senc01100 senc01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: senc00770 senc01240 senc01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: senc00780 senc01240 senc01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: senc00780 senc01240 senc01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: senc00785 senc01240 senc01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: senc00790 senc00670 senc01240 senc01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: senc00790 senc01240 senc01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: senc00860 senc01240 senc01100 senc01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: senc00860 senc01240 senc01100 senc01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: senc00860 senc01240 senc01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: senc00860 senc01240 senc01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: senc00130 senc01240 senc01100 senc01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: senc00130 senc01240 senc01100 senc01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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