KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: send00010 send01200 send01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: send00010 send01200 send01230 send01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: send00010 send00020 send01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: send00010 send00020 send00620 send00785 send01200 send01210 send01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: send00020 send01200 send01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: send00020 send01200 send01210 send01230 send01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: send00020 send01200 send01210 send01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: send00030 send01200 send01100 send01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: send00030 send01200 send01100 send01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: send00030 send01200 send01230 send01100 send01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: send00030 send01200 send01230 send01100 send01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: send00030 send00230 send01200 send01230 send01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: send00030 send01200 send01100 send01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:send00040 send00030 send01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:send00052 send01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:send00052 send01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:send00053 send01100 send01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:send00500 send01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:send00500 send01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:send00500 send01100 send01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:send00520 send01250 send01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:send00520 send00052 send01250 send01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:send00520 send01250 send01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:send00520 send01100]
M00012 Glyoxylate cycle [PATH:send00630 send01200 send01100 send01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: send00730 send01240 send01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: send00730 send01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: send00740 send01240 send01100 send01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: send00750 send01240 send01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: send00760 send01240 send01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: send00770 send01240 send01100 send01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: send00770 send01240 send01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: send00780 send01240 send01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: send00780 send01240 send01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: send00785 send01240 send01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: send00790 send00670 send01240 send01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: send00790 send01240 send01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: send00860 send01240 send01100 send01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: send00860 send01240 send01100 send01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: send00860 send01240 send01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: send00860 send01240 send01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: send00130 send01240 send01100 send01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: send00130 send01240 send01100 send01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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