KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: seo00010 seo01200 seo01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: seo00010 seo01200 seo01230 seo01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: seo00010 seo00020 seo01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: seo00010 seo00020 seo00620 seo00785 seo01200 seo01210 seo01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: seo00020 seo01200 seo01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: seo00020 seo01200 seo01210 seo01230 seo01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: seo00020 seo01200 seo01210 seo01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: seo00030 seo01200 seo01100 seo01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: seo00030 seo01200 seo01100 seo01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: seo00030 seo01200 seo01230 seo01100 seo01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: seo00030 seo01200 seo01230 seo01100 seo01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: seo00030 seo00230 seo01200 seo01230 seo01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: seo00030 seo01200 seo01100 seo01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:seo00040 seo00030 seo01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:seo00040 seo00030 seo01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:seo00052 seo01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:seo00053 seo01100 seo01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:seo00500 seo01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:seo00500 seo01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:seo00500 seo01100 seo01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:seo00520 seo01250 seo01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:seo00520 seo00052 seo01250 seo01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:seo00520 seo01250 seo01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:seo00520 seo01100]
M00012 Glyoxylate cycle [PATH:seo00630 seo01200 seo01100 seo01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: seo00730 seo01240 seo01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: seo00730 seo01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: seo00740 seo01240 seo01100 seo01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: seo00750 seo01240 seo01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: seo00760 seo01240 seo01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH: seo00380 seo00760 seo01240 seo01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: seo00770 seo01240 seo01100 seo01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: seo00770 seo01240 seo01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: seo00780 seo01240 seo01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: seo00780 seo01240 seo01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: seo00785 seo01240 seo01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: seo00790 seo00670 seo01240 seo01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: seo00790 seo01240 seo01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: seo00860 seo01240 seo01100 seo01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: seo00860 seo01240 seo01100 seo01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: seo00860 seo01240 seo01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: seo00860 seo01240 seo01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: seo00130 seo01240 seo01100 seo01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: seo00130 seo01240 seo01100 seo01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00746 Multidrug resistance, repression of porin OmpF
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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