KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sgr00010 sgr01200 sgr01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sgr00010 sgr01200 sgr01230 sgr01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sgr00010 sgr00020 sgr01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sgr00010 sgr00020 sgr00620 sgr00785 sgr01200 sgr01210 sgr01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sgr00020 sgr01200 sgr01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sgr00020 sgr01200 sgr01210 sgr01230 sgr01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sgr00020 sgr01200 sgr01210 sgr01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sgr00030 sgr01200 sgr01100 sgr01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sgr00030 sgr01200 sgr01100 sgr01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sgr00030 sgr01200 sgr01230 sgr01100 sgr01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sgr00030 sgr00230 sgr01200 sgr01230 sgr01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sgr00030 sgr01200 sgr01100 sgr01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: sgr00040 sgr01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: sgr00040 sgr00030 sgr01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: sgr00052 sgr01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: sgr00500 sgr01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: sgr00500 sgr01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: sgr00520 sgr01250 sgr01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: sgr00520 sgr00052 sgr01250 sgr01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: sgr00520 sgr01250 sgr01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: sgr00520 sgr01250 sgr01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH: sgr00520 sgr01100]
M00012 Glyoxylate cycle [PATH: sgr00630 sgr01200 sgr01100 sgr01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: sgr00280 sgr00630 sgr00640 sgr01200 sgr01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: sgr00562 sgr01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
M00057 Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH: sgr01100]
M00058 Glycosaminoglycan biosynthesis, chondroitin sulfate backbone [PATH: sgr01100]
M00059 Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH: sgr01100]
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sgr00730 sgr01240 sgr01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: sgr00730 sgr01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sgr00740 sgr01240 sgr01100 sgr01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sgr00750 sgr01240 sgr01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: sgr00750 sgr01240 sgr01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sgr00760 sgr01240 sgr01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH: sgr00760 sgr01100 sgr01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sgr00770 sgr01240 sgr01100 sgr01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sgr00770 sgr01240 sgr01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sgr00780 sgr01240 sgr01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sgr00785 sgr01240 sgr01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: sgr00785 sgr01240 sgr01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: sgr00785 sgr01240 sgr01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sgr00790 sgr00670 sgr01240 sgr01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sgr00790 sgr01240 sgr01100]
M00140 C1-unit interconversion, prokaryotes [PATH: sgr00670 sgr01240 sgr01100]
M00141 C1-unit interconversion, eukaryotes [PATH: sgr00670 sgr01240 sgr01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: sgr00860 sgr01240 sgr01100 sgr01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH: sgr00860 sgr01240 sgr01100 sgr01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sgr00860 sgr01240 sgr01100 sgr01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: sgr00860 sgr01240 sgr01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: sgr00860 sgr01240 sgr01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sgr00860 sgr01240 sgr01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sgr00130 sgr01240 sgr01100 sgr01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sgr00130 sgr01240 sgr01100 sgr01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: sgr00130 sgr01240 sgr01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
M00824 9-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 9-membered enediyne core [PATH: sgr01059 sgr01100 sgr01110]
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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