KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:shp00010 shp01200 shp01230 shp01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shp00010 shp00020 shp01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shp00010 shp00020 shp00620 shp00785 shp01200 shp01210 shp01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:shp00020 shp01200 shp01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:shp00020 shp01200 shp01210 shp01230 shp01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:shp00020 shp01200 shp01210 shp01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:shp00030 shp01200 shp01100 shp01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:shp00030 shp01200 shp01100 shp01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:shp00030 shp01200 shp01230 shp01100 shp01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:shp00030 shp00230 shp01200 shp01230 shp01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:shp00030 shp01200 shp01100 shp01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: shp00730 shp01240 shp01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: shp00740 shp01240 shp01100 shp01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: shp00750 shp01240 shp01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: shp00760 shp01240 shp01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: shp00770 shp01240 shp01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: shp00780 shp01240 shp01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: shp00785 shp01240 shp01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: shp00790 shp00670 shp01240 shp01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: shp00790 shp01240 shp01100]
M00140 C1-unit interconversion, prokaryotes [PATH: shp00670 shp01240 shp01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: shp00860 shp01240 shp01100 shp01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: shp00860 shp01240 shp01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: shp00130 shp01240 shp01100 shp01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: shp00130 shp01240 shp01100 shp01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:shp01501]
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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