KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sin00010 sin01200 sin01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sin00010 sin01200 sin01230 sin01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sin00010 sin00020 sin01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sin00010 sin00020 sin00620 sin00785 sin01200 sin01210 sin01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sin00020 sin01200 sin01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sin00020 sin01200 sin01210 sin01230 sin01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sin00020 sin01200 sin01210 sin01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sin00030 sin01200 sin01100 sin01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sin00030 sin01200 sin01100 sin01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sin00030 sin01200 sin01230 sin01100 sin01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: sin00030 sin01200 sin01230 sin01100 sin01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sin00030 sin00230 sin01200 sin01230 sin01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sin00030 sin01200 sin01100 sin01120]
M00633 Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P [PATH: sin00030 sin00052 sin01200 sin01100]
M00309 Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH: sin00030 sin00052 sin01200 sin01100 sin01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:sin00040 sin00030 sin01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sin00040 sin00030 sin01100]
M00081 Pectin degradation [PATH:sin00040 sin01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sin00052 sin01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:sin00051 sin00053 sin01240 sin01100 sin01110]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sin00500 sin01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:sin00500 sin01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:sin00500 sin01100 sin01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sin00520 sin01250 sin01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sin00520 sin00052 sin01250 sin01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:sin00520 sin01250 sin01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sin00520 sin01250 sin01100]
M00012 Glyoxylate cycle [PATH:sin00630 sin01200 sin01100 sin01110]
M00373 Ethylmalonyl pathway [PATH:sin00630 sin01200 sin01100 sin01120]
M00532 Photorespiration [PATH:sin00630 sin01200 sin01100 sin01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sin00280 sin00630 sin00640 sin01200 sin01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:sin00562 sin01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sin00730 sin01240 sin01100]
M00897 Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH: sin00730 sin01240 sin01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: sin00730 sin01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sin00740 sin01240 sin01100 sin01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sin00750 sin01240 sin01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: sin00750 sin01240 sin01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sin00760 sin01240 sin01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sin00770 sin01240 sin01100 sin01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sin00770 sin01240 sin01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: sin00780 sin01240 sin01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sin00780 sin01240 sin01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sin00785 sin01240 sin01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: sin00785 sin01240 sin01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sin00790 sin00670 sin01240 sin01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sin00790 sin01240 sin01100]
M00140 C1-unit interconversion, prokaryotes [PATH: sin00670 sin01240 sin01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: sin00860 sin01240 sin01100 sin01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sin00860 sin01240 sin01100 sin01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: sin00860 sin01240 sin01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: sin00860 sin01240 sin01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH: sin00860 sin01240 sin01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sin00860 sin01240 sin01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sin00130 sin01240 sin01100 sin01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sin00130 sin01240 sin01100 sin01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: sin00130 sin01240 sin01100]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: sin00130 sin01240 sin01100]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH: sin00130 sin01240 sin01100 sin01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH: sin00130 sin01240 sin01100 sin01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH: sin00130 sin01240 sin01100 sin01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
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