KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sli00010 sli01200 sli01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sli00010 sli01200 sli01230 sli01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sli00010 sli00020 sli01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sli00010 sli00020 sli00620 sli00785 sli01200 sli01210 sli01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sli00020 sli01200 sli01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sli00020 sli01200 sli01210 sli01230 sli01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sli00020 sli01200 sli01210 sli01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sli00030 sli01200 sli01100 sli01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sli00030 sli01200 sli01100 sli01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sli00030 sli01200 sli01230 sli01100 sli01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sli00030 sli00230 sli01200 sli01230 sli01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sli00030 sli01200 sli01100 sli01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: sli00040 sli01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: sli00040 sli00030 sli01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: sli00040 sli00030 sli01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: sli00052 sli01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: sli00052 sli01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: sli00500 sli01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: sli00500 sli01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: sli00500 sli01100 sli01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: sli00520 sli01250 sli01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: sli00520 sli00052 sli01250 sli01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: sli00520 sli01250 sli01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: sli00520 sli01250 sli01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH: sli00520 sli01100]
M00012 Glyoxylate cycle [PATH: sli00630 sli01200 sli01100 sli01110]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH: sli00410 sli00640 sli01200 sli01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: sli00280 sli00630 sli00640 sli01200 sli01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: sli00562 sli01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: sli00562 sli01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: sli00562 sli01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
M00057 Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH: sli01100]
M00059 Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH: sli01100]
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sli00730 sli01240 sli01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: sli00730 sli01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sli00740 sli01240 sli01100 sli01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sli00750 sli01240 sli01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: sli00750 sli01240 sli01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sli00760 sli01240 sli01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sli00770 sli01240 sli01100 sli01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sli00770 sli01240 sli01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: sli00780 sli01240 sli01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sli00780 sli01240 sli01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sli00785 sli01240 sli01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: sli00785 sli01240 sli01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: sli00785 sli01240 sli01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sli00790 sli00670 sli01240 sli01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH: sli00790 sli01240 sli01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sli00790 sli01240 sli01100]
M00140 C1-unit interconversion, prokaryotes [PATH: sli00670 sli01240 sli01100]
M00141 C1-unit interconversion, eukaryotes [PATH: sli00670 sli01240 sli01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: sli00860 sli01240 sli01100 sli01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH: sli00860 sli01240 sli01100 sli01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sli00860 sli01240 sli01100 sli01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: sli00860 sli01240 sli01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sli00860 sli01240 sli01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sli00130 sli01240 sli01100 sli01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: sli00130 sli01240 sli01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sli00130 sli01240 sli01100 sli01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: sli00130 sli01240 sli01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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