KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ste00010 ste01200 ste01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ste00010 ste01200 ste01230 ste01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ste00010 ste00020 ste01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ste00010 ste00020 ste00620 ste00785 ste01200 ste01210 ste01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ste00020 ste01200 ste01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ste00020 ste01200 ste01210 ste01230 ste01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ste00020 ste01200 ste01210 ste01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ste00030 ste01200 ste01100 ste01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ste00030 ste01200 ste01100 ste01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ste00030 ste01200 ste01230 ste01100 ste01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: ste00030 ste01200 ste01230 ste01100 ste01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ste00030 ste00230 ste01200 ste01230 ste01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ste00030 ste01200 ste01100 ste01120]
M00633 Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P [PATH: ste00030 ste00052 ste01200 ste01100]
M00309 Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH: ste00030 ste00052 ste01200 ste01100 ste01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ste00040 ste00030 ste01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ste00052 ste01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ste00052 ste01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ste00500 ste01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:ste00500 ste01100 ste01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ste00520 ste01250 ste01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ste00520 ste00052 ste01250 ste01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ste00520 ste01250 ste01100]
M00012 Glyoxylate cycle [PATH:ste00630 ste01200 ste01100 ste01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ste00280 ste00630 ste00640 ste01200 ste01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:ste00730 ste01240 ste01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:ste00730 ste01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ste00740 ste01240 ste01100 ste01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ste00750 ste01240 ste01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ste00760 ste01240 ste01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ste00770 ste01240 ste01100 ste01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:ste00770 ste01240 ste01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ste00780 ste01240 ste01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:ste00780 ste01240 ste01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ste00785 ste01240 ste01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:ste00785 ste01240 ste01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:ste00790 ste00670 ste01240 ste01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ste00790 ste01240 ste01100]
M00140 C1-unit interconversion, prokaryotes [PATH:ste00670 ste01240 ste01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ste00860 ste01240 ste01100 ste01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ste00860 ste01240 ste01100 ste01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:ste00860 ste01240 ste01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:ste00860 ste01240 ste01100 ste01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:ste00860 ste01240 ste01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:ste00860 ste01240 ste01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ste00860 ste01240 ste01100]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:ste01240 ste01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:ste01501]
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:ste01501]
Plant pathogenicity
Symbiosis
Module set
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