KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sto00010 sto01200 sto01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sto00010 sto01200 sto01230 sto01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sto00010 sto00020 sto01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sto00010 sto00020 sto00620 sto00785 sto01200 sto01210 sto01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sto00020 sto01200 sto01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sto00020 sto01200 sto01210 sto01230 sto01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sto00020 sto01200 sto01210 sto01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sto00030 sto01200 sto01100 sto01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sto00030 sto01200 sto01100 sto01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sto00030 sto01200 sto01230 sto01100 sto01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: sto00030 sto01200 sto01230 sto01100 sto01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sto00030 sto00230 sto01200 sto01230 sto01100]
M00633 Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P [PATH: sto00030 sto00052 sto01200 sto01100]
M00309 Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH: sto00030 sto00052 sto01200 sto01100 sto01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: sto01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: sto00052 sto01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: sto01240 sto01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: sto00500 sto01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: sto00500 sto01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: sto00520 sto01250 sto01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: sto00520 sto00052 sto01250 sto01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: sto00520 sto01250 sto01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: sto00520 sto01250 sto01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: sto00280 sto00630 sto00640 sto01200 sto01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: sto00562 sto01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: sto00562 sto01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: sto00562 sto01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: sto01100]
M00103 Cholecalciferol biosynthesis [PATH: sto01100]
M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH: sto01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: sto01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: sto01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: sto01100]
M00977 C19-Steroid hormone biosynthesis (androgen backdoor pathway), pregnenolone => androsterone => dihydrotestosterone [PATH: sto01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00073 N-glycan precursor trimming [PATH:sto01100]
M00075 N-glycan biosynthesis, complex type [PATH:sto01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH:sto01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH:sto01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH:sto01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH:sto01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:sto00730 sto01240 sto01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:sto00730 sto01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:sto00750 sto01240 sto01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sto00760 sto01240 sto01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:sto00380 sto00760 sto01240 sto01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:sto00770 sto01240 sto01100]
M00950 Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin [PATH:sto00780 sto01240 sto01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sto00785 sto01240 sto01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:sto00785 sto01240 sto01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:sto00785 sto01240 sto01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:sto00790 sto00670 sto01240 sto01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:sto00790 sto01240 sto01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sto00790 sto01240 sto01100]
M00140 C1-unit interconversion, prokaryotes [PATH:sto00670 sto01240 sto01100]
M00141 C1-unit interconversion, eukaryotes [PATH:sto00670 sto01240 sto01100]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:sto00860 sto01240 sto01100 sto01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:sto00130 sto01240 sto01100]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:sto00130 sto01240 sto01100 sto01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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