KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:vvm00010 vvm01200 vvm01230 vvm01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vvm00010 vvm00020 vvm01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vvm00010 vvm00020 vvm00620 vvm00785 vvm01200 vvm01210 vvm01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:vvm00020 vvm01200 vvm01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vvm00020 vvm01200 vvm01210 vvm01230 vvm01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vvm00020 vvm01200 vvm01210 vvm01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vvm00030 vvm01200 vvm01100 vvm01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vvm00030 vvm01200 vvm01100 vvm01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vvm00030 vvm01200 vvm01230 vvm01100 vvm01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:vvm00030 vvm00230 vvm01200 vvm01230 vvm01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vvm00030 vvm01200 vvm01100 vvm01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: vvm00730 vvm01240 vvm01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: vvm00740 vvm01240 vvm01100 vvm01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: vvm00750 vvm01240 vvm01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: vvm00760 vvm01240 vvm01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: vvm00770 vvm01240 vvm01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: vvm00780 vvm01240 vvm01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: vvm00785 vvm01240 vvm01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: vvm00790 vvm00670 vvm01240 vvm01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: vvm00790 vvm01240 vvm01100]
M00140 C1-unit interconversion, prokaryotes [PATH: vvm00670 vvm01240 vvm01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: vvm00860 vvm01240 vvm01100 vvm01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: vvm00860 vvm01240 vvm01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: vvm00130 vvm01240 vvm01100 vvm01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: vvm00130 vvm01240 vvm01100 vvm01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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