T number | T09098 |
Org_code | clit |
Name | Chondrinema litorale WSW3-B12 |
Category | Type strain |
Annotation | yes |
Taxonomy | TAX: 2994555 |
Lineage | Bacteria; Bacteroidota; Cytophagia; Cytophagales; Flammeovirgaceae; Chondrinema |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
Data source | GenBank (Assembly: GCA_026250525.1 Complete Genome) BioProject: 901263 |
Comment | Isolated from the red alga genus Chondrus collected in the West Sea, Byeonsan, Republic of Korea (35 deg 40 min 53.76 sec N 126 deg 31 min 51.96 sec E) in late autumn, 2020.
|
Chromosome | Circular |
Sequence | GB: CP111043 |
Length | 4938441 |
Plasmid | unnamed2; Circular |
Sequence | GB: CP111044 |
Length | 641076 |
Plasmid | unnamed3; Circular |
Sequence | GB: CP111045 |
Length | 524470 |
Plasmid | unnamed4 |
Sequence | GB: CP111046 |
Length | 338635 |
Plasmid | unnamed5; Circular |
Sequence | GB: CP111047 |
Length | 309758 |
Plasmid | unnamed6; Circular |
Sequence | GB: CP111048 |
Length | 304534 |
Plasmid | unnamed7; Circular |
Sequence | GB: CP111049 |
Length | 267758 |
Plasmid | unnamed8; Circular |
Sequence | GB: CP111050 |
Length | 238141 |
Plasmid | unnamed9; Circular |
Sequence | GB: CP111051 |
Length | 231362 |
Plasmid | unnamed10; Circular |
Sequence | GB: CP111052 |
Length | 223690 |
Plasmid | unnamed11; Circular |
Sequence | GB: CP111053 |
Length | 218105 |
Plasmid | unnamed12; Circular |
Sequence | GB: CP111054 |
Length | 189370 |
Plasmid | unnamed13; Circular |
Sequence | GB: CP111055 |
Length | 176344 |
Plasmid | unnamed14; Circular |
Sequence | GB: CP111056 |
Length | 171695 |
Plasmid | unnamed15; Circular |
Sequence | GB: CP111057 |
Length | 162594 |
Plasmid | unnamed16; Circular |
Sequence | GB: CP111058 |
Length | 152552 |
Plasmid | unnamed17; Circular |
Sequence | GB: CP111059 |
Length | 146538 |
Plasmid | unnamed18; Circular |
Sequence | GB: CP111060 |
Length | 139744 |
Plasmid | unnamed19; Circular |
Sequence | GB: CP111061 |
Length | 120999 |
Plasmid | unnamed20; Circular |
Sequence | GB: CP111062 |
Length | 105716 |
Plasmid | unnamed21; Circular |
Sequence | GB: CP111063 |
Length | 100318 |
Plasmid | unnamed22; Circular |
Sequence | GB: CP111064 |
Length | 96629 |
Plasmid | unnamed23 |
Sequence | GB: CP111065 |
Length | 86051 |
Plasmid | unnamed24; Circular |
Sequence | GB: CP111066 |
Length | 74661 |
Plasmid | unnamed25; Circular |
Sequence | GB: CP111067 |
Length | 74085 |
Plasmid | unnamed26; Circular |
Sequence | GB: CP111068 |
Length | 45503 |
Plasmid | unnamed27 |
Sequence | GB: CP111069 |
Length | 37472 |
Plasmid | unnamed28; Circular |
Sequence | GB: CP111070 |
Length | 15446 |
Plasmid | unnamed29; Circular |
Sequence | GB: CP111071 |
Length | 10609 |
Statistics | Number of nucleotides: 10142296 Number of protein genes: 8068 Number of RNA genes: 62
|
Created | 2023 |
Reference | |
Authors | Muhammad N, Avila F, Lee YJ, Han HL, Kim KH, Kim SG. |
Title | Chondrinema litorale gen. nov., sp. nov., of the phylum Bacteroidota, carrying multiple megaplasmids isolated from a tidal flat in the West Sea, Korea. |
Journal | Front. Mar. Sci. 10 (2023) DOI: 10.3389/fmars.2023.1186809 |