T number | T05658 |
Org_code | pagh |
Name | Planktothrix agardhii NIES-204 |
Category | Type strain |
Annotation | yes |
Taxonomy | TAX: 282423 |
Lineage | Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Planktothrix |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
Data source | GenBank (Assembly: GCA_003609755.1 Complete Genome) BioProject: 448694 |
Keywords | Photosynthesis |
Comment | Isolated from Lake Kasumigaura, Japan, which frequently experiences cyanobacterial blooms, in 1983.
|
Chromosome | Circular |
Sequence | GB: AP017991 |
Length | 4780238 |
Plasmid | plasmid1; Circular |
Sequence | GB: AP017992 |
Length | 117686 |
Plasmid | plasmid2; Circular |
Sequence | GB: AP017993 |
Length | 99115 |
Plasmid | plasmid3; Circular |
Sequence | GB: AP017994 |
Length | 52365 |
Plasmid | plasmid4; Circular |
Sequence | GB: AP017995 |
Length | 34730 |
Statistics | Number of nucleotides: 5084134 Number of protein genes: 4492 Number of RNA genes: 55
|
Created | 2018 |
Reference | PMID: 33526179 |
Authors | Shimura Y, Fujisawa T, Hirose Y, Misawa N, Kanesaki Y, Nakamura Y, Kawachi M |
Title | Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204(T) and detailed analysis of secondary metabolite gene clusters. |
Journal | Harmful Algae 101:101942 (2021) DOI: 10.1016/j.hal.2020.101942 |