ID or terms query


OC.53904 (93 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.53904 Eukaryotes.527042 Animals.315711 Vertebrates.125974 Fishes.132019     otw.22918 otw:112244014 uncharacterized protein LOC112244014
OC.53904 Bacteria.573714 Proteobacteria.69544 Gammaproteobacteria.271038 Gammaproteobacteria___Enterobacteria.83123 Pantoea.15753 Pantoea_sp_.11722 pao.4463 pao:Pat9b_4527 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Gammaproteobacteria.316388 Lysobacter.13194     lyt.1498 lyt:DWG18_07695 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335 Vitreoscilla.1516     vff.1479 vff:VITFI_CDS1620 two-component system response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42338       hyf.543 hyf:DTO96_100550 ompR; Transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Rhodoferax.1198     rfr.560 rfr:Rfer_0510 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Rhodoferax.11718     rsb.296 rsb:RS694_01300 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Rhodoferax.1198     rac.618 rac:RA876_02840 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Rhodoferax.7194     rhy.305 rhy:RD110_01260 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Polaromonas.983     pol.332 pol:Bpro_0208 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Polaromonas.983     pna.284 pna:Pnap_0151 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126     aav.365 aav:Aave_0275 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126 Acidovorax_sp_.6547   ajs.242 ajs:Ajs_0194 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.15887     dia.221 dia:Dtpsy_0213 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126     aaa.356 aaa:Acav_0332 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126 Acidovorax_sp_.2637   ack.334 ack:C380_01550 two component transcriptional regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126 Acidovorax_sp_.5083   acra.868 acra:BSY15_1703 hypothetical protein
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126 Acidovorax_carolinensis.1091   acid.207 acid:CBP33_00990 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126 Acidovorax_carolinensis.1091   acip.252 acip:CBP36_01100 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126 Acidovorax_carolinensis.1091   acin.206 acin:CBP34_01010 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Acidovorax.126 Acidovorax_carolinensis.1091   acis.2994 acis:CBP35_17850 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337       vei.2493 vei:Veis_2635 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Delftia.3442     dac.408 dac:Daci_0328 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Delftia.3442 Delftia_sp_.4245   del.345 del:DelCs14_0334 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Delftia.3442     dts.4456 dts:BI380_23535 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Delftia.3442 Delftia_sp_.5891   dhk.260 dhk:BO996_01340 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Variovorax.1799 Variovorax_paradoxus.1869   vap.300 vap:Vapar_0259 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Variovorax.1799 Variovorax_paradoxus.1869   vpe.316 vpe:Varpa_0265 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Variovorax.1799 Variovorax_paradoxus.1869   vpd.360 vpd:VAPA_1c03160 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Variovorax.1799 Variovorax_sp_.2042   vaa.1774 vaa:AX767_09370 two-component system response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Variovorax.1799     vbo.372 vbo:CKY39_01565 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Variovorax.1799 Variovorax_sp_.7108   vam.3427 vam:C4F17_17505 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Comamonas.1319 Comamonas_testosteroni.528   ctt.155 ctt:CtCNB1_0105 two component transcriptional regulator, winged
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Comamonas.1319 Comamonas_testosteroni.528   ctes.163 ctes:O987_00505 chemotaxis protein CheY
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Comamonas.7228     cke.1029 cke:B5M06_05450 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Comamonas.12327     cser.3585 cser:CCO03_19010 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Alicycliphilus.1495     adn.342 adn:Alide_0314 response regulator receiver
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Alicycliphilus.1495     adk.285 adk:Alide2_0261 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337       rta.216 rta:Rta_01950 candidate response regulator, OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337       cbx.1393 cbx:Cenrod_1473 response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Ottowia.391     oto.965 oto:ADJ79_05365 chemotaxis protein CheY
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Ottowia.391     otk.422 otk:C6570_02045 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Limnohabitans.3389     lim.410 lim:L103DPR2_00415 ompR; Transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Limnohabitans.2839     lih.2718 lih:L63ED372_02787 ompR_2; Transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Hydrogenophaga.1691     hyr.3520 hyr:BSY239_4253 hypothetical protein
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Hydrogenophaga.1691     hyb.4123 hyb:Q5W_21570 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Hydrogenophaga.1691     hyl.364 hyl:LPB072_01650 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337       dpy.2666 dpy:BA022_13870 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337       simp.1537 simp:C6571_08145 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Melaminivora.3536     melm.485 melm:C7H73_02435 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Melaminivora.2542     mela.1539 mela:C6568_07940 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       mpt.2651 mpt:Mpe_A2643 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337       har.2774 har:HEAR2981 ompR2; Transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Janthinobacterium.13192 Janthinobacterium_sp_.14282   mms.3195 mms:mma_3228 ompR7; transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.183617 Janthinobacterium.7282 Janthinobacterium_sp_.5499   jab.2034 jab:VN23_10470 two-component system response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42337 Massilia.12317     mass.459 mass:CR152_01585 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       lch.773 lch:Lcho_0735 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.224788 Thiomonas.2613     tin.842 tin:Tint_0823 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.224788 Thiomonas.2613     thi.983 thi:THI_1067 ompR2; Transcriptional regulatory protein ompR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335 Rubrivivax.2436     rge.3491 rge:RGE_35180 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335 Rubrivivax.2436     rbn.3637 rbn:RBXJA2T_18418 two component transcriptional regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       rdp.2394 rdp:RD2015_3198 Two component transcriptional regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       pkt.1837 pkt:AT984_09850 two-component system response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       miu.1861 miu:ABE85_10365 CpxR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       rgu.4316 rgu:A4W93_22510 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       aon.2769 aon:DEH84_14510 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42335       pbh.1423 pbh:AAW51_1367 CpxR
OC.53904 Bacteria.573714 Proteobacteria.69544 Betaproteobacteria.42336       fam.1027 fam:OYT1_ch0990 Transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Mesorhizobium.11636 Mesorhizobium_sp_.4444   meso.4378 meso:BSQ44_22795 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Aminobacter.1712     aak.3264 aak:AA2016_3242 Putative two component transcriptional regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Aminobacter.1712     amih.3169 amih:CO731_03218 ompR_5; Transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   sme.1467 sme:SM_b21561 two component response regulator protein
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   smk.4634 smk:Sinme_4711 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   smq.3596 smq:SinmeB_3670 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   smx.6001 smx:SM11_pD0600 putative two-component response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   smi.5622 smi:BN406_05664 ompR1; Transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   smeg.5598 smeg:C770_GR4pD0580 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   smel.2736 smel:SM2011_b21561 Putative two-component response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_meliloti.516   smer.5207 smer:DU99_28425 CpxR
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_fredii.3500   rhi.5526 rhi:NGR_c30290 two component transcriptional regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_fredii.3500   sfh.3029 sfh:SFHH103_03036 putative two component transcriptional regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_fredii.7885   sfd.2542 sfd:USDA257_c25760 ompR1; transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538     same.6212 same:SAMCFNEI73_pC1963 ompR; transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Sinorhizobium.3538 Sinorhizobium_sp_.1047   sino.969 sino:SS05631_b51830 hypothetical protein
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Ensifer.12336     esj.3841 esj:SJ05684_c16460 hypothetical protein
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Rhizobium.32332     rga.6308 rga:RGR602_PC01698 ompR-3; transcriptional regulatory protein OmpR 3
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.133987       vgo.3445 vgo:GJW-30_1_03547 ompR_3; transcriptional regulatory protein OmpR
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Methylobacterium.9380 Methylobacterium_sp_.4088   met.3327 met:M446_3564 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.79395 Methylobacterium.9380     mno.7135 mno:Mnod_8578 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.133987       rhz.4416 rhz:RHPLAN_46280 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.133987       psin.5357 psin:CAK95_28210 DNA-binding response regulator
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.133987       jan.2010 jan:Jann_2014 two component transcriptional regulator, winged helix family
OC.53904 Bacteria.573714 Proteobacteria.69544 Alphaproteobacteria.133988 Labrenzia.6205 Labrenzia_sp_.4733   labr.4303 labr:CHH27_22420 DNA-binding response regulator

( plain text of OC.53904 ) ( previous ver. )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories

sequence organism Proteobacteria Animals